Index

_

__cv (zoom.core.ZOOM attribute)

__n_jobs (zoom.core.ZOOM attribute) __seed (zoom.core.ZOOM attribute)

A

abagen_ctx() (in module zoom.prepare)

adata (zoom.core.ZOOM_SC attribute)

B

best_comp (zoom.core.ZOOM attribute)

boot_pls1() (in module zoom.pls_tool)

C

compute_gss() (in module zoom.sc_tool)

cv_PLSR() (zoom.core.ZOOM method) (zoom.core.ZOOM_SC method)

D

d (zoom.core.ZOOM_SC attribute) downstream_ans() (zoom.core.ZOOM_SC method)

downstream_DEG() (in module zoom.sc_tool) downstream_region_enrich() (in module zoom.sc_tool) DS (zoom.core.ZOOM_SC attribute)

E

expression (zoom.core.ZOOM attribute)

F

fetch_medial_wall() (in module zoom.prepare)

G

get_gene_contrib() (zoom.core.ZOOM method) (zoom.core.ZOOM_SC method) get_Q2() (in module zoom.pls_tool) get_R2() (in module zoom.pls_tool) get_SBP_score() (zoom.core.ZOOM_SC method) get_vip2() (in module zoom.pls_tool)

group_bh() (in module zoom.sc_tool) GSEA() (zoom.core.ZOOM method) (zoom.core.ZOOM_SC method) gsea_perm() (in module zoom.sc_tool) gsea_res (zoom.core.ZOOM attribute) gss_limit (zoom.core.ZOOM_SC attribute)

L

load_df() (in module zoom.data_loader) load_gii() (in module zoom.data_loader)

load_parc() (in module zoom.data_loader) load_sc() (in module zoom.data_loader)

M

model_eval() (in module zoom.pls_tool) module zoom.core zoom.data_loader zoom.pls_tool zoom.prepare zoom.sc_tool

O

optimal_component_eval() (in module zoom.pls_tool)

P

pls1_perm() (in module zoom.pls_tool) PLS_p_perm (zoom.core.ZOOM attribute) PLS_performance (zoom.core.ZOOM attribute) pls_perm() (in module zoom.pls_tool) PLS_Q2 (zoom.core.ZOOM attribute)

PLS_r (zoom.core.ZOOM attribute) PLS_report (zoom.core.ZOOM attribute) preprocess() (in module zoom.sc_tool) process_SBP() (in module zoom.prepare) processed (zoom.core.ZOOM_SC attribute)

Q

QC (zoom.core.ZOOM_SC attribute)

R

rank_expression() (in module zoom.sc_tool)

run_component_eval() (in module zoom.pls_tool)

S

SBP (zoom.core.ZOOM attribute) SBP_perm (zoom.core.ZOOM attribute) SBP_scores (zoom.core.ZOOM_SC attribute)

score_cell_zoom() (in module zoom.sc_tool) select_ctrl() (in module zoom.sc_tool) sign_perm (zoom.core.ZOOM attribute)

V

vip_perm() (in module zoom.pls_tool)

W

weight_perm (zoom.core.ZOOM attribute)

Z

ZOOM (class in zoom.core) zoom.core module zoom.data_loader module zoom.pls_tool module

zoom.prepare module zoom.sc_tool module ZOOM_SC (class in zoom.core)